Mongodb Search And AI
MongoDBOfficialPublished by MongoDB
- Skill
- Tool integration
- Data and AI
- Apache-2.0
- Low risk
- Has scripts
AutoGineer summary
Written by AutoGineer from the skill’s own files, not by the author
This skill provides a comprehensive framework for integrating search capabilities into MongoDB applications. It covers the full spectrum of search technologies available in MongoDB, including lexical full-text search, semantic vector search, and hybrid approaches. The skill guides users through the entire lifecycle of search implementation: from initial discovery and use-case validation to index configuration, query construction, and performance optimization. It emphasizes best practices, such as choosing the right search type based on specific business needs, and provides structured workflows for both manual and automated embedding scenarios.
What it does
- Helps users choose between Atlas Search, Vector Search, and Hybrid Search.
- Provides workflows for creating and managing search indexes.
- Assists in constructing complex aggregation pipelines for search queries.
- Offers guidance on using Automated Embedding for semantic search without custom code.
- Explains how to implement hybrid search using rank-based or score-based fusion.
- Validates search configurations against cluster requirements and best practices.
When to use it
- When you need to add full-text, semantic, or hybrid search to a MongoDB collection.
- When you are unsure which MongoDB search technology best fits your specific data and use case.
- When you need to optimize existing search queries or troubleshoot index performance.
- When you want to implement RAG or semantic search but lack existing embedding infrastructure.
- When you need to combine keyword-based filtering with semantic similarity.
Advantages
- Prevents common anti-patterns like using inefficient regex or text operators.
- Ensures search implementations are aligned with specific MongoDB cluster capabilities.
- Simplifies complex search concepts into actionable, step-by-step workflows.
- Provides clear guidance on model selection for automated embeddings.
- Promotes performance-oriented index design and query construction.
Usage examples
- “How do I implement semantic search for my product catalog?”
- The agent will initiate a discovery phase to inspect your collection schema, determine if you have existing embeddings, and recommend either Automated Embedding or manual Vector Search.
- “What is the difference between Atlas Search and Vector Search?”
- The agent will explain the technical distinctions between lexical and semantic search and help you decide which is appropriate for your specific data requirements.
- “I want to combine keyword filtering with vector similarity.”
- The agent will guide you through the Hybrid Search workflow, explaining how to use lexical prefilters or fusion stages like $rankFusion.
- “Help me get started with search.”
- The agent will offer a choice between a guided tour using sample data or a discovery process to build search features directly for your own data.
Install
Download the skill as a ZIP:
https://autogineer.com/agent-skills/mongodb/mongodb-search-and-ai/downloadUnzip it into the cross-client skills folder of your project:
mkdir -p .agents/skills && unzip mongodb-search-and-ai.zip -d .agents/skills
Documentation by MongoDB
MongoDB Search and AI Recommendations Skill
You are helping MongoDB users implement, optimize, and troubleshoot Atlas Search (lexical), Vector Search (semantic), and Hybrid Search (combined) solutions.
Core Principles
Understand before building - Validate the use case to ensure you recommend the right solution
Always inspect first - Check existing indexes and schema before making recommendations
Explain before executing - Describe what indexes will be created and require explicit approval
Handle read-only scenarios - Without
create,update, ordeleteoperation tools you are in read-only mode; hand the user index JSON to create themselvesExplain in accessible language - Describe technical concepts and map business requirements to technical implementations in terms the user can follow
Workflow
0. Check for a Quickstart Request
references/quick-start.md is a guided walkthrough that builds semantic, keyword, and hybrid search against the sample_mflix sample dataset. It is a teaching tour, not a way to build search for the user's own data.
Do not read references/quick-start.md until the user has chosen the tour. A general request like "I'm new to search, help me get started" can just as easily mean "help me add search to my app." Use AskUserQuestion:
"Two ways I can take this — which fits better?"
Guided tour on sample data — we load Atlas's sample movie dataset and build semantic, keyword, and hybrid search on it step by step. Best for learning how each type works.
Build search for my own data — tell me what you're searching and I'll design the indexes and queries for your collections.
Prompts that should trigger this offer, rather than being answered directly as a question:
"I'm new to MongoDB, how does search work?", "help me get started with search"
"what's the difference between Atlas Search and Vector Search?", "which search type should I use?"
"I want to try vector search", "show me semantic search", "how does automated embedding work?"
"I want to try keyword search", "show me full-text search", "I want to try hybrid search"
Skip the offer only when the intent is already unambiguous:
Explicit tour request ("give me a guided tour", "walk me through search using sample data") — load
references/quick-start.mdand start at its Step 0.The user has their own collection, data, or concrete use case — use the Discovery Phase below, even when they name a single search type.
If the user named a specific search type, carry that into the walkthrough: it skips its own path question and routes straight to that path, after its prerequisite steps.
The walkthrough requires an Atlas cloud cluster — the sample dataset loads from the Atlas UI, and Automated Embedding works on every Atlas tier with no key management. Atlas Local and self-managed MongoDB are out of scope; the walkthrough routes them back here when a step gives evidence of one.
Otherwise, continue with the Discovery Phase.
1. Discovery Phase
Check the environment:
Use
list-databasesandlist-collectionsto understand available dataIf the user mentions a collection, use
collection-schemato inspect field structureUse
collection-indexesto see existing indexesUse
atlas-inspect-clusterto determine the cluster's MongoDB version
Understand the use case: If the user's request is vague:
Ask clarifying questions about their needs
Infer likely collection and fields from schema
Confirm understanding before proceeding
Common questions to ask:
What are users searching for? (products, movies, documents, etc.)
What fields contain the searchable content?
Are they searching by free text, or by similarity to an existing item (e.g. "given movie A, find similar movies")?
Do they need exact matching, fuzzy matching, or semantic similarity?
Do they need filters (price ranges, categories, dates)?
Do they need autocomplete/typeahead functionality?
Do they already generate vector embeddings, or do they want MongoDB to handle that automatically?
2. Determine Search Type and Consult the Reference File
Match the use case to a search type below, then consult the linked reference file before recommending indexes or queries. Each reference file also documents the prerequisites you must verify first (cluster tier, MongoDB version, deployment type, auto-scaling).
Atlas Search (Lexical/Full-Text): Use when users need:
Keyword matching with relevance scoring
Fuzzy matching for typo tolerance
Autocomplete/typeahead
Faceted search with filters
Language-specific text analysis
Token-based search
Lexical search with views
→ Consult both references/lexical-search-indexing.md (index) and references/lexical-search-querying.md (query).
Automated Embedding (Semantic search, no embedding code): Use when users need:
Semantic / vector search without writing embedding code
No existing vector pipeline or embedding infrastructure
Quick setup: MongoDB auto-generates and manages embeddings using Voyage AI models
Text data already stored in Atlas that they want to search by meaning
RAG or AI agent memory with minimal setup
→ Consult references/automated-embedding.md.
Vector Search (Semantic, bring your own embeddings): Use when users need:
Semantic similarity with their own pre-generated embeddings
A specific embedding model not provided by Voyage AI
Image, audio, or multimodal embeddings (Automated Embedding is text-only)
Self-managed MongoDB without Voyage AI API key configured
Vector search with views
→ Consult references/vector-search.md.
Hybrid Search: Use when users need:
Combining multiple search approaches (e.g., vector + lexical, multiple text searches)
Queries like "find action movies similar to 'epic space battles'" (combining keyword filtering with semantic similarity)
Results that factor in multiple relevance criteria
Uses
$rankFusion(rank-based) or$scoreFusion(score-based) to merge pipelines
→ Consult references/hybrid-search.md, plus the lexical/vector files for the individual pipeline stages.
3. Execution and Validation
Creating indexes:
Explain the index configuration in plain language
Show the JSON structure
Ask what the user wants to name the index
Get explicit approval: "Should I create this index?"
Use MCP's
create-indextool after approvalIn read-only mode, provide the complete index JSON for creation via the Atlas UI
Running queries:
Show the aggregation pipeline
Execute using MCP's
aggregatetoolPresent results clearly
Refining existing queries:
Ask the user to share their current query
Compare against the query patterns and best practices in the relevant reference file(s)
Propose specific improvements with before/after examples
Run the revised query with
aggregateto validate the results
Anti-Patterns to Avoid
NEVER recommend $regex or $text for search use cases. Both lack the relevance scoring, fuzzy matching, and language-aware tokenization that search workloads need. If a user asks for either, explain why Atlas Search is more appropriate and show the equivalent pattern.
Handling Edge Cases
Fields you can't find — inspect available fields with
collection-schema, then confirm the intended field with the userA required field doesn't exist — explain what to add and how (e.g., an embedding field for vector search)
Query fails or index missing — verify with
collection-indexes; if absent, the index must be created firstMultiple collections are relevant — ask which one they mean, unless context makes it obvious
Files
- ATTRIBUTION.mdAdded by AutoGineer845 B
- LICENSELicence file added by AutoGineer11.1 KiB
- SKILL.md8.7 KiB
- references/automated-embedding.md15.9 KiB
- references/hybrid-search.md23.1 KiB
- references/lexical-search-indexing.md19.5 KiB
- references/lexical-search-querying.md17.5 KiB
- references/quick-start.md45.1 KiB
- references/vector-search.md18.7 KiB
- scripts/quickstart_complete.pyScript13.6 KiB
references/lexical-search-querying.md
Lexical Search - Querying
This guide covers query patterns and optimization techniques for MongoDB Atlas Search.
Table of Contents
$search vs $searchMeta
Query Patterns
Query Optimization
Query Performance Analysis
$search vs $searchMeta
Both stages must be the first stage in an aggregation pipeline.
| Stage | Use When |
|---|---|
$search | You need matching documents, with or without metadata |
$searchMeta | You only need metadata (count, facets) — no documents returned |
$searchMeta shares the following fields with $search: index, all operator names (e.g. text, range, compound), concurrent (parallelizes search across segments on dedicated search nodes only — ignored otherwise), and returnStoredSource.
Query Patterns
Operator Reference
| Operator | Description |
|---|---|
autocomplete | Search-as-you-type from incomplete input |
compound | Combines multiple operators into a single query |
embeddedDocument | Queries fields inside arrays of objects |
equals | Exact match on boolean, date, number, objectId, token, uuid |
exists | Tests for presence of a field |
geoShape | Queries shapes by spatial relation (geo type, indexShapes: true) |
geoWithin | Queries points within a region (geo type) |
hasAncestor | Queries ancestor-level fields when using returnScope |
hasRoot | Queries root-level fields when using returnScope |
in | Queries single values or arrays of values |
moreLikeThis | Finds documents similar to a given document |
near | Queries values near a number, date, or geo point |
phrase | Searches for terms in a specific order |
queryString | Boolean/field-specific query syntax |
range | Queries values within a numeric, date, string, or objectId range |
regex | Regular expression matching on string fields |
text | Full-text analyzed search on string fields |
vectorSearch | Semantic search with lexical pre-filters (vector type in search index) |
wildcard | Wildcard pattern matching on string fields |
Count Results
Use the count option in $searchMeta to count matching documents without fetching them. Also works in $search via the $SEARCH_META aggregation variable when you need both results and count.
// Count only (recommended)
db.movies.aggregate([
{
$searchMeta: {
range: { path: "year", gte: 2010, lte: 2015 },
count: { type: "lowerBound" } // or "total" for exact count
}
}
])
// Returns: { count: { lowerBound: NumberLong(1001) } }// Count alongside results using $SEARCH_META
db.movies.aggregate([
{
$search: {
text: { path: "title", query: "<query>" },
count: { type: "total" }
}
},
{ $project: { title: 1, meta: "$SEARCH_META" } },
{ $limit: 10 }
])| type | Behavior |
|---|---|
lowerBound | Approximate. Exact up to threshold (default 1000), rough above it. |
total | Exact count. Slower on large result sets. |
Note: Count affects performance — use only when needed (e.g., first page of paginated results).
Pagination with searchSequenceToken
Cursor-based pagination using tokens. More efficient than $skip alone for deep pagination.
Step 1 — Get tokens from the initial query:
db.movies.aggregate([
{
$search: {
index: "<index-name>",
text: { path: "title", query: "summer" },
sort: { released: 1, _id: 1 } // Sort on a unique field to prevent tie-ordering issues
}
},
{ $limit: 10 },
{
$project: {
title: 1, released: 1,
paginationToken: { $meta: "searchSequenceToken" }
}
}
])Step 2 — Next page using searchAfter:
db.movies.aggregate([
{
$search: {
index: "<index-name>",
text: { path: "title", query: "summer" },
searchAfter: "<token-from-last-document-on-previous-page>",
sort: { released: 1, _id: 1 } // maintain the same sort order
}
},
{ $limit: 10 },
{ $project: { title: 1, paginationToken: { $meta: "searchSequenceToken" } } }
])Use searchBefore with the first document's token on the current page to go to the previous page — results are returned in reverse order. Combine searchAfter with $skip to jump pages.
Key constraint: Query semantics (operator, path, query value, sort) must be identical between the initial query and any searchAfter/searchBefore query.
Retrieve Arrays of Objects with returnScope
Return each element of an embedded document array as an individually scored document. Works in both $search and $searchMeta.
Requirements:
Array field indexed as
embeddedDocumentstype withstoredSourcedefined on the fields to returnreturnStoredSource: truein the queryAll operator paths must be nested under
returnScope.path(usehasAncestororhasRootto query outside it)
Index:
{
"mappings": {
"dynamic": false,
"fields": {
"funding_rounds": {
"type": "embeddedDocuments",
"dynamic": true,
"storedSource": {
"include": ["round_code", "raised_currency_code", "raised_amount"]
}
}
}
}
}Query:
db.companies.aggregate([
{
$search: {
range: { path: "funding_rounds.raised_amount", gte: 5000000, lte: 10000000 },
returnStoredSource: true,
returnScope: { path: "funding_rounds" }
}
},
{ $limit: 5 }
])Only fields defined in storedSource within the embedded document are returned — root-level fields are excluded. When returnScope is specified, all query paths must start with returnScope.path.
Advanced Query Syntax (queryString)
Use case: Complex search with boolean operators, wildcards, and field-specific queries.
Fields configuration:
// Add to mappings.fields in your index:
{
"title": { "type": "string" },
"director": { "type": "string" },
"year": { "type": "number" }
}Query patterns:
// Boolean operators
db.collection.aggregate([
{
$search: {
index: "search_index",
queryString: {
defaultPath: "title",
query: "detective AND (noir OR thriller) NOT comedy"
}
}
}
])
// Field-specific searches
db.collection.aggregate([
{
$search: {
index: "search_index",
queryString: {
defaultPath: "title",
query: "title:inception AND director:nolan"
}
}
}
])
// Wildcards and ranges
db.collection.aggregate([
{
$search: {
index: "search_index",
queryString: {
defaultPath: "title",
query: "star* AND year:[2010 TO 2020]"
}
}
}
])Supported syntax:
Boolean:
AND,OR,NOTGrouping:
(term1 OR term2)Wildcards:
*(0+ chars),?(single char)Ranges:
[min TO max]for numbers/datesField-specific:
fieldName:value
Key considerations:
Great for building search UIs with advanced options
Users can construct complex queries without API changes
Validate/sanitize user input to prevent injection
Searching Nested Arrays (embeddedDocument)
Use case: Search within arrays of objects where element-wise comparisons are required (similar to $elemMatch), or each element must be scored independently.
Fields configuration:
// Add to mappings.fields in your index:
{
"title": { "type": "string" },
"reviews": {
"type": "embeddedDocuments", // Required for array search
"fields": {
"author": { "type": "string" },
"text": { "type": "string" },
"rating": { "type": "number" }
}
}
}Query pattern:
db.collection.aggregate([
{
$search: {
index: "search_index",
embeddedDocument: {
path: "reviews",
operator: {
compound: {
must: [
{ text: { query: "excellent", path: "reviews.text" } }
],
filter: [
{ range: { path: "reviews.rating", gte: 4 } }
]
}
},
score: { embedded: { aggregate: "maximum" } } // or sum, minimum, mean
}
}
}
])Score aggregation options:
sum: Add scores from all matching array elementsmaximum: Use highest score from array elementsminimum: Use lowest score from array elementsmean: Average scores from array elements
Key considerations:
Each array element is indexed as a separate document
Use
embeddedDocumentsfield type, not regulardocumentScore aggregation controls how array matches affect overall document score
Performance can be degraded due to complexity of parent-child joins
Search Highlighting
Use case: Show users which parts of documents matched their query.
Fields configuration:
// Add to mappings.fields in your index:
{
"title": { "type": "string" },
"plot": { "type": "string" }
}Query pattern:
db.collection.aggregate([
{
$search: {
index: "search_index",
text: {
query: "detective noir",
path: "plot"
},
highlight: {
path: "plot",
maxCharsToExamine: 500000, // Default
maxNumPassages: 5 // Number of snippets
}
}
},
{
$project: {
title: 1,
plot: 1,
highlights: { $meta: "searchHighlights" },
score: { $meta: "searchScore" }
}
}
])Highlight result structure:
{
"highlights": [
{
"path": "plot",
"texts": [
{ "value": "A ", "type": "text" },
{ "value": "detective", "type": "hit" },
{ "value": " investigates a murder in ", "type": "text" },
{ "value": "noir", "type": "hit" },
{ "value": " Los Angeles", "type": "text" }
],
"score": 1.23
}
]
}Key considerations:
type: "hit"indicates matched termstype: "text"is surrounding contextMultiple passages returned for long documents
Use in search results UI to show match context
Compound Queries
Compound queries combine multiple operators efficiently:
db.collection.aggregate([
{
$search: {
index: "search_index",
compound: {
must: [
{ text: { query: "detective", path: "plot" } } // Required, affects score
],
should: [
{ text: { query: "mystery", path: "genre" } } // Optional, boosts score
],
filter: [
{ range: { path: "year", gte: 2000 } } // Required, no score impact
],
mustNot: [
{ text: { query: "comedy", path: "genre" } } // Excludes results
]
}
}
}
])Clause types:
must: Required matches that affect scoringshould: Optional matches that boost scoresfilter: Required matches that don't affect scoring (faster)mustNot: Exclusions
Performance tips:
Use
filterinstead ofmustfor criteria that shouldn't affect scoring (faster)Put most selective criteria in
mustorfilterfirstLimit
shouldclauses to 3-5 for best performance
Query with Synonyms
When your index is configured with synonyms, specify the synonym mapping name in your query:
db.collection.aggregate([
{
$search: {
index: "search_index",
text: {
query: "car chase",
path: "description",
synonyms: "synonym-mapping-name" // Reference the mapping from your index
}
}
}
])Note: When you specify a synonym mapping name, MongoDB Search automatically searches for the query terms AND all their synonyms (e.g., "car" also matches "automobile", "vehicle").
Using Multi Analyzers
Query specific analyzer variants of a field:
// Standard fuzzy search
db.collection.aggregate([
{
$search: {
index: "search_index",
text: {
query: "Action",
path: "title" // Uses default analyzer
}
}
}
])
// Exact match using keyword analyzer
db.collection.aggregate([
{
$search: {
index: "search_index",
text: {
query: "Action",
path: "title.keywordAnalyzer" // Uses alternate analyzer
}
}
}
])Use case: Support both fuzzy and exact matching on the same field without duplicating data.
Autocomplete
Search-as-you-type on fields indexed as autocomplete type (see lexical-search-indexing.md).
| Option | Description |
|---|---|
query | String to search |
path | Field indexed as autocomplete |
tokenOrder | any (tokens in any order; sequential matches score higher) or sequential (tokens must be adjacent) |
fuzzy | { maxEdits: 1|2, prefixLength: <n>, maxExpansions: <n> } |
To score exact matches higher, index the field as both autocomplete and string types and query using compound.
Facet
Groups results into buckets by field values or ranges. Use with $searchMeta for metadata only, or with $search + $SEARCH_META variable for results and metadata.
{ "$searchMeta": { "facet": {
"operator": { <operator> },
"facets": {
"<facet-name>": { "type": "string|number|date", "path": "<field>", ...options }
}
} } }| Facet type | Field index type | Bucket definition |
|---|---|---|
string | token | Top N unique string values. numBuckets defaults to 10. |
number | number | Numeric ranges via boundaries array + optional default bucket |
date | date | Date ranges via boundaries array + optional default bucket |
geoShape
Query shapes by spatial relation. Field must be indexed as geo type with indexShapes: true. Required fields: geometry (GeoJSON Polygon, MultiPolygon, or LineString), path, and relation:
| relation | Meaning |
|---|---|
contains | Indexed geometry contains the query geometry |
disjoint | No overlap between geometries |
intersects | Geometries overlap |
within | Indexed geometry is within the query geometry (not supported for LineString or Point) |
geoWithin
Query geographic points within a region. Field must be indexed as geo type. Specify one of:
box:{ bottomLeft: <GeoJSON Point>, topRight: <GeoJSON Point> }circle:{ center: <GeoJSON Point>, radius: <meters> }geometry: GeoJSON Polygon or MultiPolygon
For both geo operators: longitude must be specified before latitude; longitude range [-180, 180], latitude range [-90, 90].
Query Optimization
Sorting Search Results
Use the sort option inside $search to sort at the mongot level (more efficient than a $sort stage after). Supports: boolean, date, number, objectId, uuid, and string (must be indexed as token type). Cannot sort on embeddedDocuments type fields.
db.collection.aggregate([
{
$search: {
text: { ... },
sort: { "fieldName": -1, "title": 1, score: { $meta: "searchScore" } }
}
},
{ $limit: 10 }
])Sort by score:
sort: { score: { $meta: "searchScore", order: 1 } } // ascending (lowest score first)
sort: { score: { $meta: "searchScore" } } // descending (default)Null/missing values: Appear first in ascending sort by default. Use noData: "highest" to push them last:
sort: { "field": { order: 1, noData: "highest" } }Key rules:
sortinside$searchonly works on indexed fields — use$sortafter for non-indexed or computed fieldsFor
searchSequenceTokenpagination, sort must include a unique field (e.g.,_id) to avoid tie-orderingArrays: ascending uses smallest element, descending uses largest
Using Stored Source
Retrieve frequently accessed fields directly from the search index instead of the database:
db.collection.aggregate([
{
$search: {
index: "search_index",
text: { query: "detective", path: "plot" },
returnStoredSource: true // Retrieve from mongot, not DB
}
},
{ $limit: 20 },
{ $match: { rating: { $gte: 7 } } } // Filter on stored fields
])Requirements:
Fields must be configured in
storedSourcein your index definitionDramatically improves performance by avoiding database lookups
Especially beneficial when filtering or sorting after $search
$match After $search
Minimize blocking stages after $search — prefer encapsulating filter logic inside the $search stage itself using compound.filter. This avoids additional mongod operations and makes full use of the Atlas Search index.
Prefer compound.filter over $match for fields indexed in the search index (string, token, number, date, boolean, objectId, uuid, geo):
// Prefer this
{ $search: { compound: { must: [{ text: { ... } }], filter: [{ range: { path: "year", gte: 2000 } }] } } }
// Avoid this where possible
{ $search: { text: { ... } } },
{ $match: { year: { $gte: 2000 } } }If you must use $match (e.g., for non-indexed or computed fields), use storedSource + returnStoredSource to avoid a full document lookup in mongod:
{ $search: { text: { ... }, returnStoredSource: true } },
{ $match: { storedField: { $exists: true } } }Query Performance Analysis
Use explain to analyze query performance:
db.collection.explain("executionStats").aggregate([
{ $search: { /* ... */ } }
])Important: Atlas Search explain output differs from standard MongoDB explain. It shows execution on the search engine (mongot) side with Lucene-specific statistics, not standard MongoDB execution plans.
Requirements and compatibility
Written for: Claude Code
Works with: Claude Code, Claude apps, OpenAI Codex, GitHub Copilot, Cursor, Gemini CLI, Kiro, OpenCode, Goose, Amp, Roo Code, JetBrains Junie, Factory Droid, Devin (ex-Windsurf), Mistral Vibe, OpenHands, Letta
“Works with” means the tool reads the open Agent Skills format; a skill written for one tool may use features others lack.
Needs: Names Claude Code tools, Needs an API key, Needs Python
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Attribution and licence
- Published by
- MongoDB
- Publisher
- MongoDB (Official)
- Source
- mongodb/agent-skills · skills/mongodb-search-and-ai · commit 155bb9c
- Licence
- Apache License 2.0 (redistribution allowed)
- LICENSE (added by AutoGineer from LICENSE)
- ATTRIBUTION.md (written by AutoGineer)
- Synced
- Also distributed in
- mongodb/agent-skills, mongodb/agent-skills
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