Markdown Mermaid Writing
K-DenseCommunityCreated by Clayton Young / Superior Byte Works, LLC (@borealBytes)Distributed by K-Dense
- Skill
- Tool integration
- Documents and content
- Apache-2.0
- Low risk
AutoGineer summary
Written by AutoGineer from the skill’s own files, not by the author
This skill provides a structured approach to creating technical and scientific documentation using Markdown and Mermaid. It emphasizes the use of text-based diagrams for structural clarity, ensuring that workflows, architectures, and data models remain editable, version-controlled, and accessible. The skill includes templates for various document types and comprehensive guides for 23 different Mermaid diagram types, ensuring consistent formatting and adherence to accessibility standards.
What it does
- Writes scientific Markdown reports, READMEs, and research documentation.
- Creates structural Mermaid diagrams for workflows, timelines, schemas, and architectures.
- Provides templates for common technical documents like ADRs, pull requests, and status reports.
- Offers style guides for consistent Markdown formatting and Mermaid diagram design.
- Includes accessibility guidance for diagrams using titles and descriptions.
- Supports version-aware rendering checks for Mermaid diagrams.
When to use it
- When you need to document complex workflows, system architectures, or data relationships.
- When you want to maintain diagrams as editable text within a Git repository.
- When creating technical reports that require a consistent, professional house style.
- When you need to ensure your diagrams are accessible and renderable across different platforms.
Advantages
- Diagrams are stored as plain text, making them easily diffable and version-controlled.
- Reduces token usage compared to long-form text descriptions of relationships.
- Promotes a consistent documentation style across projects.
- Supports accessibility through standardized metadata.
- Facilitates easy updates to diagrams without needing specialized image editing software.
Usage examples
- “Create a Mermaid flowchart for a data processing pipeline.”
- Generates a Markdown-formatted document containing a Mermaid flowchart block that maps the data pipeline steps, following the established style guide.
- “Draft an Architecture Decision Record (ADR) for a new database choice.”
- Produces a structured Markdown document using the ADR template, including placeholders for context, decision, and consequences.
- “How do I create a sequence diagram for an API interaction?”
- Provides the specific Mermaid sequence diagram syntax, a copy-paste template, and tips on how to style it according to the project's guidelines.
- “Check if my Mermaid diagram is accessible.”
- Reviews the diagram code for required accessibility metadata (accTitle/accDescr) and suggests improvements based on the Mermaid style guide.
Install
Download the skill as a ZIP:
https://autogineer.com/agent-skills/k-dense-ai/markdown-mermaid-writing/downloadUnzip it into the cross-client skills folder of your project:
mkdir -p .agents/skills && unzip markdown-mermaid-writing.zip -d .agents/skills
Documentation by Clayton Young / Superior Byte Works, LLC (@borealBytes)
Markdown and Mermaid Writing
Overview
This skill provides an optional house style for Markdown documentation with Mermaid structural diagrams. Follow the requested output format, existing repository conventions, and journal requirements first. This skill does not replace scientific analysis or plotting.
A relationship expressed as Mermaid inside a .md file is editable text that diffs
cleanly in git. A compatible host renders it without a separate user build step.
It renders where the host has Mermaid support; plain Markdown viewers may show only code,
and platforms/extensions ship different Mermaid versions. It uses
a compact source representation, though token use depends on the diagram. Exporting
SVG/PNG requires a renderer; retain the diagram source alongside exported figures.
"The more you get your reports and files in .md in just regular text, which mermaid is as well as being a simple 'script language'. This just helps with any downstream rendering and especially AI generated images (using mermaid instead of just long form text to describe relationships < tokens). Additionally mermaid can render along with markdown for easy use almost anywhere by humans or AI."
— Clayton Young (@borealBytes), K-Dense Discord, 2026-02-19
When to Use This Skill
Use this skill when:
Writing a requested Markdown report, README, methods overview, or research note
Diagramming a workflow, data pipeline, schema, state machine, or conceptual relationship
Maintaining editable Mermaid sources and their rendered SVG/PNG exports
Use scientific plotting tools directly for measured data, uncertainty, statistical graphics, exact geometry, or publication figures that Mermaid cannot faithfully represent. Mermaid is not a required precursor to a quantitative chart or an existing SVG/code-native asset.
🎨 The Source Format Philosophy
Why text-based diagrams win
| What matters | Mermaid in Markdown | Python / AI Image |
|---|---|---|
| Git diff readable | ✅ text source | Plotting code/SVG can also be text |
| Editable source | ✅ | Plotting scripts and vector sources are editable |
| Compact relationship notation | Often | Depends on representation |
| Native preview | Host/version dependent | Viewer/format dependent |
| Parseable by AI without vision | ✅ | ❌ |
| Works in destination | Check Mermaid support and version | Check image format support |
| Accessible (screen readers) | Check SVG metadata and text alternative | Provide alt text/data table |
| Convertible to image later | ✅ anytime | — already image |
The three-phase workflow
flowchart LR
accTitle: Three-Phase Documentation Workflow
accDescr: Markdown holds the structural diagram source. Quantitative charts come from data and plotting code; optional illustrations require a separate factual review.
p1["📄 Phase 1<br/>Mermaid in Markdown<br/>(structural source)"]
p2["🐍 Phase 2<br/>Python Generated<br/>(optional — data charts)"]
p3["🎨 Phase 3<br/>AI Generated Visuals<br/>(optional — polish)"]
out["📊 Final Deliverable"]
p1 --> out
data["Data and plotting code"] --> p2
p1 -.->|"when needed"| p3
p2 --> out
p3 --> out
classDef required fill:#dbeafe,stroke:#2563eb,stroke-width:2px,color:#1e3a5f
classDef optional fill:#fef9c3,stroke:#ca8a04,stroke-width:2px,color:#713f12
classDef output fill:#dcfce7,stroke:#16a34a,stroke-width:2px,color:#14532d
class p1 required
class p2,p3 optional
class out outputRetain Mermaid for structural diagrams and data/code for quantitative charts. An AI illustration is not a quantitative conversion; verify every label and relationship against its sources.
What Mermaid can express
This skill includes 23 diagram-type guides plus a composition guide. Mermaid supports additional types; these references are a curated subset, not an exhaustive version catalogue:
| Use case | Diagram type | File |
|---|---|---|
| Experimental workflow / decision logic | Flowchart | references/diagrams/flowchart.md |
| Service interactions / API calls / messaging | Sequence | references/diagrams/sequence.md |
| Data model / schema | ER diagram | references/diagrams/er.md |
| State machine / lifecycle | State | references/diagrams/state.md |
| Project timeline / roadmap | Gantt | references/diagrams/gantt.md |
| Proportions / composition | Pie | references/diagrams/pie.md |
| System architecture (zoom levels) | C4 | references/diagrams/c4.md |
| Concept hierarchy / brainstorm | Mindmap | references/diagrams/mindmap.md |
| Chronological events / history | Timeline | references/diagrams/timeline.md |
| Class hierarchy / type relationships | Class | references/diagrams/class.md |
| User journey / satisfaction map | User Journey | references/diagrams/user_journey.md |
| Two-axis comparison / prioritization | Quadrant | references/diagrams/quadrant.md |
| Requirements traceability | Requirement | references/diagrams/requirement.md |
| Flow magnitude / resource distribution | Sankey | references/diagrams/sankey.md |
| Numeric trends / bar + line charts | XY Chart | references/diagrams/xy_chart.md |
| Component layout / spatial arrangement | Block | references/diagrams/block.md |
| Work item status / task columns | Kanban | references/diagrams/kanban.md |
| Cloud infrastructure / service topology | Architecture | references/diagrams/architecture.md |
| Multi-dimensional comparison / skills radar | Radar | references/diagrams/radar.md |
| Hierarchical proportions / budget | Treemap | references/diagrams/treemap.md |
| Binary protocol / data format | Packet | references/diagrams/packet.md |
| Git branching / merge strategy | Git Graph | references/diagrams/git_graph.md |
| Code-style sequence (programming syntax) | ZenUML | references/diagrams/zenuml.md |
| Multi-diagram composition patterns | Complex Examples | references/diagrams/complex_examples.md |
💡 Pick the right type, not the easy one. Don't default to flowcharts for everything. A timeline beats a flowchart for chronological events. A sequence beats a flowchart for service interactions. Scan the table and match.
🔧 Core workflow
Step 1: Identify the document type
Check if a template exists before writing from scratch:
| Document type | Template |
|---|---|
| Pull request record | templates/pull_request.md |
| Issue / bug / feature request | templates/issue.md |
| Sprint / project board | templates/kanban.md |
| Architecture decision (ADR) | templates/decision_record.md |
| Presentation / briefing | templates/presentation.md |
| Research paper / analysis | templates/research_paper.md |
| Project documentation | templates/project_documentation.md |
| How-to / tutorial | templates/how_to_guide.md |
| Status report | templates/status_report.md |
Step 2: Read the style guide
For this Markdown workflow, read references/markdown_style_guide.md. Treat emoji,
heading counts, and horizontal rules as house style rather than Markdown syntax requirements.
Key rules to internalize:
One H1 per document — the title. Never more.
Emoji on H2 headings only — one emoji per H2, none in H3/H4
Support factual claims — use verified sources and the requested citation format
Bold sparingly — max 2-3 bold terms per paragraph, never full sentences
Optional horizontal rules after
</details>when they improve separationTables over prose for comparisons, configurations, structured data
Diagrams over walls of text — if it describes flow, structure, or relationships, add Mermaid
Step 3: Pick the diagram type and read its guide
Before creating any Mermaid diagram: read references/mermaid_style_guide.md.
Then open the specific type file (e.g., references/diagrams/flowchart.md) for the exemplar, tips, and copy-paste template.
Add accessibility metadata for types that emit it in the chosen renderer:
accTitle: Short Name 3-8 Words
accDescr: One or two sentences explaining what this diagram shows.Prefer host themes;
%%{init}directives are deprecated in favor of YAML configurationPrefer reusable
classDefwhere supported; style syntax is diagram-specificOne emoji per node max — at the start of the label
Use descriptive IDs with the type's syntax:
snake_caseworks for flowcharts; ER/class/state conventions differ
Step 4: Write the document
Start from the template. Apply the markdown style guide. Place diagrams inline with related text — not in a separate "Figures" section.
Render in the actual destination before delivery. Check its Mermaid version and
plugin requirements before choosing newer diagram types; GitHub documents an info
diagram for this check.
A successful latest-version local preview does not establish GitHub or another host
will render it. Where Mermaid is unsupported, supply a rendered SVG/PNG with a text
description alongside the retained .md source.
Step 5: Retain source and verification
Keep the .md source, rendered deliverable, and tested renderer version together.
Follow the project's version-control workflow; this skill does not itself authorize a commit or publication.
For CLI export, embedding, and the tested accessibility matrix, read
Current rendering and validation.
⚠️ Common pitfalls
Radar chart syntax (radar-beta)
WRONG (shown as text so it does not break the document renderer):
radar
title Example
x-axis ["A", "B", "C"]
"Series" : [1, 2, 3]CORRECT:
radar-beta
accTitle: Example Radar Scores
accDescr: Illustrative values of one, two, and three on a shared zero-to-three scale.
title Example
axis a["A"], b["B"], c["C"]
curve series["Series"]{1, 2, 3}
max 3Use
radar-betanotradar(the bare keyword doesn't exist)Use
axisto define dimensions, notx-axisUse
curveto define data series, not quoted labels with colonMermaid 12.0.0 radar emits
accTitle/accDescr; check older hosts and retain a visible description
XY Chart vs Radar confusion
| Diagram | Keyword | Axis syntax | Data syntax |
|---|---|---|---|
| XY Chart (bars/lines) | xychart-beta | x-axis ["Label1", "Label2"] | bar [10, 20] or line [10, 20] |
| Radar (spider/web) | radar-beta | axis id["Label"] | curve id["Label"]{10, 20} |
Forgetting accTitle/accDescr on supported types
Only some diagram types support accTitle/accDescr. For those that don't, always place a descriptive italic paragraph directly above the code block:
Radar chart comparing three methods on a stated, common score scale. See the data table for exact values.
radar-beta
...🔗 Integration with other skills
With scientific-schematics
scientific-schematics generates AI-powered publication-quality images (PNG). Use the Mermaid diagram as the brief for the schematic:
Workflow:
1. Create the concept as Mermaid in .md (this skill — Phase 1)
2. Describe the same concept to scientific-schematics for a polished PNG (Phase 3)
3. Commit both — the .md as source, the PNG as a supplementary figureWith scientific-writing
For a manuscript that uses Mermaid structural figures, this skill handles diagram syntax. Follow the manuscript's required figure formats and scientific visualization conventions.
Workflow:
1. Use scientific-writing to draft the manuscript
2. For every figure that shows a workflow, architecture, or relationship:
- Replace placeholder with a Mermaid diagram following this skill's guide
3. Use plotting or schematic tools where appropriate to the scientific contentWith literature-review
Literature review produces summaries with lots of relationship data. Use this skill to:
Create concept maps (Mindmap) of the literature landscape
Show publication timelines (Timeline or Gantt)
Compare methodologies (Quadrant or Radar)
Diagram data flows described in papers (Sequence or Flowchart)
With any skill that produces output documents
Before finalizing a document using this skill, check:
[ ] Does the document use a template? If so, did I start from the right one?
[ ] Is each diagram in an appropriate format, with working accessibility metadata or a text alternative?
[ ] Is configuration supported by the destination and tested in light/dark themes?
[ ] Do citations support external claims, and are synthetic values labeled?
[ ] One H1, emoji on H2 only?
[ ] Does the final Markdown/HTML structure render correctly?
📚 Reference index
Style guides
| Guide | Path | Lines | What it covers |
|---|---|---|---|
| Markdown Style Guide | references/markdown_style_guide.md | see file | Headings, formatting, citations, tables, Mermaid integration, templates, quality checklist |
| Mermaid Style Guide | references/mermaid_style_guide.md | see file | Accessibility, emoji set, color classes, theme neutrality, type selection, complexity tiers |
| Current Rendering | references/current-rendering.md | see file | Mermaid 12 changes, CLI export, browser APIs, tested accessibility matrix, scientific checks |
Diagram guides (23 types plus composition)
Each file contains: production-quality exemplar, tips specific to that type, and a copy-paste template.
references/diagrams/ — architecture, block, c4, class, complex_examples, er, flowchart, gantt, git_graph, kanban, mindmap, packet, pie, quadrant, radar, requirement, sankey, sequence, state, timeline, treemap, user_journey, xy_chart, zenuml
Document templates (9 types)
templates/ — decision_record, how_to_guide, issue, kanban, presentation, project_documentation, pull_request, research_paper, status_report
Examples
assets/examples/example-research-report.md — a synthetic quality-control report with explicitly invented data, an auditable count table, a structural flowchart, a bar chart, and a chronology. It makes no experimental or software API claims.
📝 Attribution
All style guides, diagram type guides, and document templates in this skill are ported from the SuperiorByteWorks-LLC/agent-project repository under the Apache-2.0 License.
Source: https://github.com/SuperiorByteWorks-LLC/agent-project
Author: Clayton Young / Superior Byte Works, LLC (@borealBytes)
License: Apache-2.0
This skill (as part of scientific-agent-skills) is distributed under the MIT License. The included Apache-2.0 content is compatible for downstream use with attribution retained, as preserved in the file headers throughout this skill.
[^1]: GitHub Blog. (2022). "Include diagrams in your Markdown files with Mermaid." https://github.blog/2022-02-14-include-diagrams-markdown-files-mermaid/
[^2]: Mermaid. "Mermaid Diagramming and Charting Tool." https://mermaid.js.org/
Files
- ATTRIBUTION.mdAdded by AutoGineer1.1 KiB
- LICENSEAdded by AutoGineer10.0 KiB
- SKILL.md16.3 KiB
- assets/examples/example-research-report.md3.4 KiB
- references/current-rendering.md7.6 KiB
- references/diagrams/architecture.md5.0 KiB
- references/diagrams/block.md5.0 KiB
- references/diagrams/c4.md6.7 KiB
- references/diagrams/class.md8.6 KiB
- references/diagrams/complex_examples.md16.8 KiB
- references/diagrams/er.md8.0 KiB
- references/diagrams/flowchart.md7.0 KiB
- references/diagrams/gantt.md6.0 KiB
- references/diagrams/git_graph.md2.2 KiB
- references/diagrams/kanban.md4.0 KiB
- references/diagrams/mindmap.md2.5 KiB
- references/diagrams/packet.md2.4 KiB
- references/diagrams/pie.md1.9 KiB
- references/diagrams/quadrant.md2.6 KiB
- references/diagrams/radar.md2.8 KiB
- references/diagrams/requirement.md3.0 KiB
- references/diagrams/sankey.md2.6 KiB
- references/diagrams/sequence.md5.9 KiB
- references/diagrams/state.md5.7 KiB
- references/diagrams/timeline.md4.5 KiB
- references/diagrams/treemap.md2.6 KiB
- references/diagrams/user_journey.md5.2 KiB
- references/diagrams/xy_chart.md2.6 KiB
- references/diagrams/zenuml.md2.5 KiB
- references/markdown_style_guide.md32.4 KiB
- references/mermaid_style_guide.md26.6 KiB
- templates/decision_record.md7.2 KiB
- templates/how_to_guide.md7.1 KiB
- templates/issue.md11.6 KiB
- templates/kanban.md10.6 KiB
- templates/presentation.md8.1 KiB
- templates/project_documentation.md11.5 KiB
- templates/pull_request.md11.8 KiB
- templates/research_paper.md10.1 KiB
- templates/status_report.md7.2 KiB
references/mermaid_style_guide.md
<!-- Source: https://github.com/SuperiorByteWorks-LLC/agent-project | License: Apache-2.0 | Author: Clayton Young / Superior Byte Works, LLC (Boreal Bytes) -->
Mermaid Diagram Style Guide
For AI agents: Read this file for all core styling rules. Then use the diagram selection table to pick the right type and follow its link — each type has its own file with a production-quality exemplar, tips, and a copy-paste template.
For humans: This guide + the linked diagram files provide a starting point for readable diagrams; validate rendering and accessibility in the actual destination. Reference it from your
AGENTS.mdor contributing guide.
Target platform: Mermaid-capable Markdown; check the particular host and version. Verified renderer: Mermaid 12.0.0. See Current rendering and validation for CLI export, browser APIs, and accessibility results. These are house-style preferences, not Mermaid grammar or universal GitHub guarantees. All business workflows, endpoints, scores, and dates in examples are illustrative. Design goal: Minimal professional styling that renders beautifully in both GitHub light and dark modes, is accessible to screen readers, and communicates clearly with zero visual noise.
Quick Start for Agents
Pick the diagram type → Selection table
Open that type's file → Copy the template, fill in your content
Apply styling from this file → Emoji from approved set, colors from approved palette
Add accessibility →
accTitle+accDescr(or italic Markdown paragraph for unsupported types)Verify → Renders in light mode, dark mode, and screen reader
Core Principles
| # | Principle | Rule |
|---|---|---|
| 1 | Clarity at every scale | Simple diagrams stay flat. Complex ones use subgraphs. Very complex ones split into overview + detail. |
| 2 | Accessibility always | Use supported SVG metadata plus a visible description; verify the exported result. |
| 3 | Theme neutral | Prefer host themes and documented per-type styling; verify contrast. |
| 4 | Semantic clarity | snake_case node IDs that match labels. Active voice. Sentence case. |
| 5 | Consistent styling | Same emoji = same meaning everywhere. Same shapes = same semantics. |
| 6 | Minimal professional flair | A touch of emoji + strategic bold + optional classDef — never more. |
Accessibility Requirements
Use both annotations where the renderer supports them:
accTitle: Short Name 3-8 Words
accDescr: One or two sentences explaining what this diagram shows and what insight the reader gains from itaccTitle— 3–8 words, plain text, names the diagramaccDescr— 1–2 sentences; single-line form is convenient. Mermaid also supportsaccDescr { ... }across multiple lines
Mermaid 12.0.0 emits these annotations for flowchart, sequence, class, state, ER, gantt, pie, git graph, journey, requirement, quadrant, XY, architecture, packet, radar, and treemap. Block, kanban, mindmap, and Sankey need a visible text alternative. Timeline accepts annotations but the tested SVG omitted both; C4 omitted the SVG title. ZenUML is a separate plugin. See the tested matrix in Current rendering and validation. A paragraph does not automatically become an SVG accessible name; include meaningful image alt text when exporting, and a data table or detailed equivalent for complex figures.
ZenUML note: ZenUML requires an external plugin and may not render on GitHub. Prefer standard
sequenceDiagramsyntax.
Theme Configuration
✅ Do: No theme directive (GitHub auto-detects)
flowchart LR
accTitle: Secure API Request Flow
accDescr: Three-step API request from authentication through processing to response
auth[🔐 Authenticate] --> process[⚙️ Process request] --> respond[📤 Return response]Prefer host defaults unless custom styling is required
%% Custom colors may reduce contrast; inspect both themes
style A fill:#e8f5e9
%%{init: {'theme':'base'}}%%Approved Emoji Set
One emoji per node, at the start of the label. Same emoji = same meaning across all diagrams in a project.
Systems & Infrastructure
| Emoji | Meaning | Example |
|---|---|---|
| ☁️ | Cloud / platform / hosted service | [☁️ AWS Lambda] |
| 🌐 | Network / web / connectivity | [🌐 API gateway] |
| 🖥️ | Server / compute / machine | [🖥️ Application server] |
| 💾 | Storage / database / persistence | [💾 PostgreSQL] |
| 🔌 | Integration / plugin / connector | [🔌 Webhook handler] |
Processes & Actions
| Emoji | Meaning | Example |
|---|---|---|
| ⚙️ | Process / configuration / engine | [⚙️ Build pipeline] |
| 🔄 | Cycle / sync / recurring process | [🔄 Retry loop] |
| 🚀 | Deploy / launch / release | [🚀 Ship to production] |
| ⚡ | Fast action / trigger / event | [⚡ Webhook fired] |
| 📦 | Package / artifact / bundle | [📦 Docker image] |
| 🔧 | Tool / utility / maintenance | [🔧 Migration script] |
| ⏰ | Scheduled / cron / time-based | [⏰ Nightly job] |
People & Roles
| Emoji | Meaning | Example |
|---|---|---|
| 👤 | User / person / actor | [👤 End user] |
| 👥 | Team / group / organization | [👥 Platform team] |
| 🤖 | Bot / agent / automation | [🤖 CI bot] |
| 🧠 | Intelligence / decision / AI | [🧠 ML classifier] |
Status & Outcomes
| Emoji | Meaning | Example |
|---|---|---|
| ✅ | Success / approved / complete | [✅ Tests passed] |
| ❌ | Failure / blocked / rejected | [❌ Build failed] |
| ⚠️ | Warning / caution / risk | [⚠️ Rate limited] |
| 🔒 | Locked / restricted / protected | [🔒 Requires admin] |
| 🔐 | Security / encryption / auth | [🔐 OAuth handshake] |
Information & Data
| Emoji | Meaning | Example |
|---|---|---|
| 📊 | Analytics / metrics / dashboard | [📊 Usage metrics] |
| 📋 | Checklist / form / inventory | [📋 Requirements] |
| 📝 | Document / log / record | [📝 Audit trail] |
| 📥 | Input / receive / ingest | [📥 Event stream] |
| 📤 | Output / send / emit | [📤 Notification] |
| 🔍 | Search / review / inspect | [🔍 Code review] |
| 🏷️ | Label / tag / version | [🏷️ v2.1.0] |
Domain-Specific
| Emoji | Meaning | Example |
|---|---|---|
| 💰 | Finance / cost / billing | [💰 Invoice] |
| 🧪 | Testing / experiment / QA | [🧪 A/B test] |
| 📚 | Documentation / knowledge base | [📚 API docs] |
| 🎯 | Goal / target / objective | [🎯 OKR tracking] |
| 🗂️ | Category / organize / archive | [🗂️ Backlog] |
| 🔗 | Link / reference / dependency | [🔗 External API] |
| 🛡️ | Protection / guardrail / policy | [🛡️ Rate limiter] |
| 🏁 | Start / finish / milestone | [🏁 Sprint complete] |
| ✏️ | Edit / revise / update | [✏️ Address feedback] |
| 🎨 | Design / creative / UI | [🎨 Design review] |
| 💡 | Idea / insight / inspiration | [💡 Feature idea] |
Emoji Rules
Place at start:
[🔐 Authenticate]not[Authenticate 🔐]Max one per node — never stack
Consistency is mandatory — same emoji = same concept across all diagrams
Not every node needs one — use on key nodes that benefit from visual distinction
No decorative emoji: 🎉 💯 🔥 🎊 💥 ✨ — they add noise, not meaning
Suggested Color Classes
Use only when you genuinely need color-coding (multi-actor diagrams, severity levels). Prefer shapes + emoji first.
Suggested palette (verify in your target light and dark themes):
| Semantic Use | classDef Definition | Visual |
|---|---|---|
| Primary / action | fill:#dbeafe,stroke:#2563eb,stroke-width:2px,color:#1e3a5f | Light blue fill, blue border, dark navy text |
| Success / positive | fill:#dcfce7,stroke:#16a34a,stroke-width:2px,color:#14532d | Light green fill, green border, dark forest text |
| Warning / caution | fill:#fef9c3,stroke:#ca8a04,stroke-width:2px,color:#713f12 | Light yellow fill, amber border, dark brown text |
| Danger / critical | fill:#fee2e2,stroke:#dc2626,stroke-width:2px,color:#7f1d1d | Light red fill, red border, dark crimson text |
| Neutral / info | fill:#f3f4f6,stroke:#6b7280,stroke-width:2px,color:#1f2937 | Light gray fill, gray border, near-black text |
| Accent / highlight | fill:#ede9fe,stroke:#7c3aed,stroke-width:2px,color:#3b0764 | Light violet fill, purple border, dark purple text |
| Warm / commercial | fill:#ffedd5,stroke:#ea580c,stroke-width:2px,color:#7c2d12 | Light peach fill, orange border, dark rust text |
Live preview — all 7 classes rendered:
flowchart LR
accTitle: Color Palette Preview
accDescr: Visual reference showing all seven approved classDef color classes side by side
primary[🔵 Primary] ~~~ success[✅ Success] ~~~ warning[⚠️ Warning] ~~~ danger[❌ Danger]
neutral[ℹ️ Neutral] ~~~ accent[🟣 Accent] ~~~ warm[🟠 Warm]
classDef primary fill:#dbeafe,stroke:#2563eb,stroke-width:2px,color:#1e3a5f
classDef success fill:#dcfce7,stroke:#16a34a,stroke-width:2px,color:#14532d
classDef warning fill:#fef9c3,stroke:#ca8a04,stroke-width:2px,color:#713f12
classDef danger fill:#fee2e2,stroke:#dc2626,stroke-width:2px,color:#7f1d1d
classDef neutral fill:#f3f4f6,stroke:#6b7280,stroke-width:2px,color:#1f2937
classDef accent fill:#ede9fe,stroke:#7c3aed,stroke-width:2px,color:#3b0764
classDef warm fill:#ffedd5,stroke:#ea580c,stroke-width:2px,color:#7c2d12
class primary primary
class success success
class warning warning
class danger danger
class neutral neutral
class accent accent
class warm warmRules:
Always include
color:(text color) — dark-mode backgrounds can hide default textUse
classDef+classwhere the diagram supports them.styleis valid Mermaid syntax; C4 and sequence use different styling mechanismsMax 3–4 color classes per diagram
Never rely on color alone — always pair with emoji, shape, or label text
Node Naming & Labels
| Rule | ✅ Good | ❌ Bad |
|---|---|---|
snake_case IDs | run_tests, deploy_prod | A, B, node1 |
| IDs match labels | open_pr → "Open PR" | x → "Open PR" |
| Specific names | check_unit_tests | check |
| Verbs for actions | run_lint, deploy_app | linter, deployment |
| Nouns for states | review_state, error | reviewing, erroring |
| 3–6 word labels | [📥 Fetch raw data] | [Raw data is fetched from source] |
| Active voice | [🧪 Run tests] | [Tests are run] |
| Sentence case | [Start pipeline] | [Start Pipeline] |
| Edge labels 1–4 words | A short phrase such as Yes | Long sentence labels |
Node Shapes
Use shapes consistently to convey node type without color:
| Shape | Syntax | Meaning |
|---|---|---|
| Rounded rectangle | ([text]) | Start / end / terminal |
| Rectangle | [text] | Process / action / step |
| Diamond | {text} | Decision / condition |
| Subroutine | [[text]] | Subprocess / grouped action |
| Cylinder | [(text)] | Database / data store |
| Asymmetric | >text] | Event / trigger / external |
| Hexagon | {{text}} | Preparation / initialization |
Bold Text
Flowchart Markdown strings need double quotes around a backtick-delimited label:
flowchart LR
accTitle: Markdown Label Example
accDescr: Two pipeline stages, with the first label using Markdown emphasis.
start["`Run **quality control**`"] --> finish["Review results"]Plain labels such as node[**text**] do not reliably interpret emphasis. Other
diagram types have their own formatting support; prefer plain labels unless tested.
Subgraphs
Subgraphs are the primary tool for organizing complex diagrams. They create visual groupings that help readers parse structure at a glance.
subgraph name ["📋 Descriptive Title"]
node1 --> node2
endSubgraph rules:
Quoted titles with emoji:
["🔍 Code Quality"]Group by stage, domain, team, or layer — whatever creates the clearest mental model
2–6 nodes per subgraph is ideal; up to 8 if tightly related
Subgraphs can connect to each other via edges between their internal nodes
One level of nesting is acceptable when it genuinely clarifies hierarchy (e.g., a "Backend" subgraph containing "API" and "Workers" subgraphs). Avoid deeper nesting.
Give every subgraph a meaningful ID and title —
subgraph deploy ["🚀 Deployment"]notsubgraph sg3
Connecting subgraphs — choose the right level of detail:
Use subgraph-to-subgraph edges when the audience needs the high-level flow and internal details would be noise:
subgraph build ["📦 Build"]
compile --> package
end
subgraph deploy ["🚀 Deploy"]
stage --> prod
end
build --> deployUse internal-node-to-internal-node edges when the audience needs to see exactly which step hands off to which:
subgraph build ["📦 Build"]
compile --> package
end
subgraph deploy ["🚀 Deploy"]
stage --> prod
end
package --> stagePick based on your audience:
| Audience | Connect via | Why |
|---|---|---|
| Leadership / overview | Subgraph → subgraph | They need phases, not steps |
| Engineers / operators | Internal node → internal node | They need the exact handoff points |
| Mixed / documentation | Both in separate diagrams | Overview diagram + detail diagram |
Managing Complexity
Not every diagram is simple, and that's fine. The goal is clarity at every scale — a 5-node flowchart and a 30-node system diagram should both be immediately understandable. Use the right strategy for the complexity level.
Complexity tiers
| Tier | Node count | Strategy |
|---|---|---|
| Simple | 1–10 nodes | Flat diagram, no subgraphs needed |
| Moderate | 10–20 nodes | Use subgraphs to group related nodes into 2–4 logical clusters |
| Complex | 20–30 nodes | Subgraphs are mandatory. 3–6 subgraphs, each with a clear title and purpose. Consider whether an overview + detail approach would be clearer. |
| Very complex | 30+ nodes | Split into multiple diagrams. Create an overview diagram showing subgraph-level relationships, then a detail diagram per subgraph. Link them in prose. |
When to use subgraphs vs. split into multiple diagrams
Use subgraphs when:
The connections between groups are essential to understanding (splitting would lose that)
A reader needs to see the full picture in one place (e.g., deployment pipeline, request lifecycle)
Each group has 2–6 nodes and there are 3–5 groups total
Split into multiple diagrams when:
Groups are mostly independent (few cross-group connections)
The single diagram would exceed ~30 nodes even with subgraphs
Different audiences need different views (overview for leadership, detail for engineers)
The diagram is too wide/tall to read without scrolling
Use overview + detail pattern when:
You need both the big picture AND the details
The overview shows subgraph-level blocks with key connections
Each detail diagram zooms into one subgraph with full internal structure
Link them: "See Managing complexity for the full scaling guidance."
Best practices at any scale
One primary flow direction per diagram —
TBfor hierarchies/processes,LRfor pipelines/timelines. Mixed directions confuse readers.Decision points — keep to ≤3 per subgraph. If a single subgraph has 4+ decisions, it deserves its own focused diagram.
Edge crossings — minimize by grouping tightly-connected nodes together. If edges are crossing multiple subgraphs chaotically, reorganize the groupings.
Labels stay concise regardless of diagram size — 3–6 words per node, 1–4 words per edge. Complexity comes from structure, not verbose labels.
Color-code subgraph purpose — in complex diagrams, use
classDefclasses to visually distinguish layers (e.g., all "data" nodes in one color, all "API" nodes in another). Max 3–4 classes even in large diagrams.
Composing multiple diagrams
When a single diagram isn't enough — multiple audiences, overview + detail needs, or before/after migration docs — see Composing Complex Diagram Sets for patterns and production-quality examples showing how to combine flowcharts, sequences, ER diagrams, and more into cohesive documentation.
Choosing the Right Diagram
Read the "best for" column, then follow the link to the type file for the exemplar diagram, tips, and template.
| You want to show... | Type | File |
|---|---|---|
| Steps in a process / decisions | Flowchart | flowchart.md |
| Who talks to whom, when | Sequence | sequence.md |
| Class hierarchy / type relationships | Class | class.md |
| Status transitions / lifecycle | State | state.md |
| Database schema / data model | ER | er.md |
| Project timeline / roadmap | Gantt | gantt.md |
| Parts of a whole (proportions) | Pie | pie.md |
| Git branching / merge strategy | Git Graph | git_graph.md |
| Concept hierarchy / brainstorm | Mindmap | mindmap.md |
| Events over time (chronological) | Timeline | timeline.md |
| User experience / satisfaction map | User Journey | user_journey.md |
| Two-axis prioritization / comparison | Quadrant | quadrant.md |
| Requirements traceability | Requirement | requirement.md |
| System architecture (zoom levels) | C4 | c4.md |
| Flow magnitude / resource distribution | Sankey | sankey.md |
| Numeric trends (bar + line charts) | XY Chart | xy_chart.md |
| Component layout / spatial arrangement | Block | block.md |
| Work item status board | Kanban | kanban.md |
| Binary protocol / data format | Packet | packet.md |
| Infrastructure topology | Architecture | architecture.md |
| Multi-dimensional comparison / skills | Radar | radar.md |
| Hierarchical proportions / budget | Treemap | treemap.md |
| Code-style sequence (programming syntax) | ZenUML | zenuml.md |
Pick the most specific type. Don't default to flowcharts — match your content to the diagram type that was designed for it. A sequence diagram communicates service interactions better than a flowchart ever will.
Known Parser Gotchas
These will save you debugging time:
| Diagram Type | Gotcha | Fix |
|---|---|---|
| Architecture | Label support varies in older hosts | Mermaid 12 accepts Unicode; preview on the destination |
| Architecture | Older hosts may reject punctuation | Mermaid 12 accepts [US-East Region]; verify older versions |
| Architecture | --> arrow syntax is strict about spacing | Use lb:R --> L:api format exactly |
| Requirement | Unquoted punctuation in fields can fail | Quote strings: id: "REQ-001", docref: "component-ref" |
| Requirement | Risk and verification use enumerated values | Copy documented values such as risk: high, verifymethod: test |
| C4 | Long descriptions cause label overlaps | Keep descriptions under 4 words; use UpdateRelStyle() for offsets |
| C4 | Emoji in labels render but look odd | Skip emoji in C4 — renderer has its own icons |
| Flowchart | The word end breaks parsing | Wrap in quotes: ["End"] or use end_node as ID |
| Sankey | Emoji labels failed in the tested parser | Prefer plain text; quote fields containing commas or double quotes |
| ZenUML | Requires external plugin | May not render on GitHub — prefer sequenceDiagram |
| Treemap | Experimental syntax and host versions vary | Verify the destination renderer before using |
| Radar | Requires v11.6.0+ | Verify GitHub supports it before using |
Quality Checklist
Every Diagram
[ ]
accTitle+accDescrpresent (or italic Markdown paragraph for unsupported types)[ ] Complexity managed: ≤10 nodes flat, 10–30 with subgraphs, 30+ split into multiple diagrams
[ ] Subgraphs used if >10 nodes (grouped by stage, domain, team, or layer)
[ ] ≤3 decision points per subgraph
[ ] Semantic
snake_caseIDs[ ] Labels: 3–6 words, active voice, sentence case
[ ] Edge labels: 1–4 words
[ ] Consistent shapes for consistent meanings
[ ] Single primary flow direction (
TBorLR)[ ] Per-type style syntax and readable contrast verified
[ ] Minimal edge crossings (reorganize groupings if chaotic)
If Using Color/Emoji/Bold
[ ] Colors from approved palette using
classDef+class[ ] Text
color:included in everyclassDef[ ] ≤4 color classes
[ ] Emoji from approved set, max 1 per node
[ ] Bold on max 1–2 words per node
[ ] Meaning never conveyed by color alone
Before Merge
[ ] Renders in GitHub light mode
[ ] Renders in GitHub dark mode
[ ] Emoji meanings consistent across all diagrams in the document
Testing
Destination: Preview in the actual host and toggle its light/dark appearance. Do not publish solely to run a rendering test.
Local: Run the pinned CLI examples in Current rendering and validation. Editor preview extensions may bundle another Mermaid version.
Live editor: mermaid.live — paste and toggle themes
Screen reader: Verify
accTitle/accDescrannounced (VoiceOver, NVDA, JAWS)
Resources
Markdown Style Guide — Formatting, citations, and document structure for the markdown that wraps your diagrams
Mermaid Docs · Live Editor · Accessibility · GitHub Support · Mermaid CLI
Requirements and compatibility
Works with: Claude Code, Claude apps, OpenAI Codex, GitHub Copilot, Cursor, Gemini CLI, Kiro, OpenCode, Goose, Amp, Roo Code, JetBrains Junie, Factory Droid, Devin (ex-Windsurf), Mistral Vibe, OpenHands, Letta
“Works with” means the tool reads the open Agent Skills format; a skill written for one tool may use features others lack.
Needs: Declares allowed tools, Needs Node.js
The author says: Markdown authoring needs no runtime. Local rendering targets Mermaid and Mermaid CLI 12.0.0, Node.js 22.13+ and a supported Chromium browser. Package or CDN installation needs network access; no credentials required.
Security
What our scanner noticed· Low risk
- Instructions that use the network
A static scan is not a guarantee. Skills are third-party content: review a skill before you let an agent use it.
Attribution and licence
- Created by
- Clayton Young / Superior Byte Works, LLC (@borealBytes)
- Publisher
- K-Dense (Community)
- Distributed by
- K-Dense
- Source
- K-Dense-AI/scientific-agent-skills · skills/markdown-mermaid-writing · commit a25cf9e
- Licence
- Apache License 2.0 (redistribution allowed)
- LICENSE (written by AutoGineer)
- ATTRIBUTION.md (written by AutoGineer)
- Synced
AutoGineer is not affiliated with or endorsed by Clayton Young / Superior Byte Works, LLC (@borealBytes) or K-Dense.
Download ZIP
The ZIP holds the skill’s files, its licence files and an ATTRIBUTION.md. Download markdown-mermaid-writing.zip