Imaging Data Commons
K-Dense· Community
Query, filter, and download public cancer imaging datasets from the NCI Imaging Data Commons.
Trusted skills for AI agents from official vendors and established maintainers. Every skill is attributed to its author, scanned, and comes with install steps for your AI tool.
378 skills
K-Dense· Community
Query, filter, and download public cancer imaging datasets from the NCI Imaging Data Commons.
K-Dense· Community
Develop and simulate lab automation protocols using the PyLabRobot 0.2.2 framework.
K-Dense· Community
A Python toolkit for analyzing, manipulating, and visualizing phylogenetic and hierarchical trees using ETE 4.
K-Dense· Community
A comprehensive toolkit for pharmacokinetic and pharmacodynamic modeling, simulation, and data analysis.
K-Dense· Community
A comprehensive Python library for computational molecular biology, sequence analysis, and bioinformatics workflows.
K-Dense· Community
Automated QIIME 2 workflow for processing paired-end 16S amplicon sequencing data with provenance tracking.
K-Dense· Community
Resolves and validates scientific labels against standard ontologies using EBI OLS4, Bioregistry, and other research-focused identifier services.
K-Dense· Community
A toolkit for working with Outpost Bio's Waypoint microbiome foundation models and the Compass benchmark.
K-Dense· Community
Perform exact symbolic mathematics, calculus, and equation solving using the SymPy Python library.
K-Dense· Community
Query and analyze public pathogen genomic surveillance data from GenSpectrum and Pathoplexus LAPIS deployments.
K-Dense· Community
Perform bulk RNA-seq differential expression analysis using PyDESeq2 with support for GLMs, Wald tests, and LFC shrinkage.
K-Dense· Community
Compiles verified scholarly evidence and creates a structured research packet for scientific manuscripts.
K-Dense· Community
Build, run, and debug reproducible data pipelines using Nextflow DSL2 and nf-core workflows.
K-Dense· Community
Automated equilibrium phase calculations for thermodynamic TDB databases using pycalphad.
K-Dense· Community
A research-only toolkit for documenting and validating clinical decision-support evaluation, governance, and evidence-profile artifacts.
K-Dense· Community
Integrate with Benchling using the Python SDK and REST API to automate lab data, registry entities, inventory, and ELN workflows.
K-Dense· Community
Generates scientific diagram drafts using Nano Banana 2 AI with smart iterative refinement. Uses Gemini 3.7 Flash for quality review. Refines when the review requests improvement, with at most two generations. Specialized in neural network architectures, system diagrams, flowcharts, biological pathways, and complex scientific visualizations.
K-Dense· Community
Build, differentiate, and optimize quantum circuits and hybrid quantum-classical models using PennyLane.
K-Dense· Community
A workflow for analyzing pooled CRISPR screens using MAGeCK to identify gene hits and perform quality control.
K-Dense· Community
Builds and analyzes phylogenetic trees using MAFFT multiple sequence alignment, IQ-TREE maximum likelihood with ModelFinder and branch support, and FastTree approximate inference. Uses ETE3 for tree summaries and visualization. Applies to homologous nucleotide or protein sequences, microbial gene trees, protein families, and cautiously interpreted dated phylogenies.
K-Dense· Community
Provides planning, auditing, and configuration tools for the HypoGeniC package to assist in LLM-based hypothesis generation from labeled text datasets.
K-Dense· Community
A reproducible workflow for processing 1D NMR free-induction decays into phased spectra and integrated regions.
K-Dense· Community
Provides workflows for accessing and evaluating therapeutic machine learning datasets and benchmarks via PyTDC.
K-Dense· Community
A comprehensive framework for geospatial research, covering remote sensing, GIS, spatial statistics, and Earth observation data processing.